PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN39978.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 336aa    MW: 38591.5 Da    PI: 4.7986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN39978.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11173216654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  KHN39978.1 173 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILGDTIDYMKEL 216
                 589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.18167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-15171229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-9173216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-11173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-15174228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.63E-4174220No hitNo description
CDDcd048734.84E-4262325No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MELHDHDFLE ELMSLRRETW DTNPCSQENQ LFSNGWSFDC FDQNYHQAFP PNSFSCQQVP  60
QSYNHDYTYN EIYSSLLHEF SAPQVIDSSS YNTLDSTPHN TPPFLAQEDY PLSMMEEEDP  120
GFLGEELQCL DLQTTCKMES SHSPEMPIFN TTSSCVERKN RAKKLQGQPS KNLMAERRRR  180
KRLNDRLSML RSIVPKISKM DRTAILGDTI DYMKELLEKI NNLKQEIEVD SNMASIFKDV  240
KPNEIIVRNS PKFDVERRNV TTRVEICCAG KPGLLLSTVN TLETLGLEIQ QCVISCFNDF  300
TVQASCSEEL QQKTILSSED IKQALFRSAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0973250.0BT097325.1 Soybean clone JCVI-FLGm-16G7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003544841.10.0PREDICTED: transcription factor bHLH61-like
SwissprotQ9LSL12e-81BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2S5J30.0A0A0B2S5J3_GLYSO; Transcription factor bHLH93
TrEMBLI1MB280.0I1MB28_SOYBN; Uncharacterized protein
STRINGGLYMA14G36370.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-82beta HLH protein 93
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]